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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
982
total RNA-seq
907
ChIP-seq
185
ATAC-seq
178
DNase-seq
169
single cell RNA-seq
87
RNA microarray
27
WGBS
25
pCHi-C
22
snATAC-seq
16
small RNA-seq
15
Hi-C
11
RRBS
4
FAIRE-seq
MeRIP-seq
3
snDrop-seq
Date released
84
February, 2021
20
March, 2020
4
October, 2019
2
December, 2019
1
August, 2021
1
May, 2021
Available data
84
txt
22
tsv
Organism
111
Homo sapiens
Biosample type
112
tissue
17
primary cell
6
cell line
5
in vitro differentiated cells
4
stem cell
Organ
84
bone element
4
eye
3
heart
2
adipose tissue
2
brain
2
connective tissue
2
intestine
2
kidney
2
thymus
1
adrenal gland
1
blood vessel
1
epithelium
1
esophagus
1
gonad
1
large intestine
1
liver
1
lung
1
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
stomach
1
urinary bladder
1
vasculature
Project
111
AMP
1
T1D
Lab
111
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
86
inconsistent ontology term
2
audit script error
assay_title!
MeRIP-seq
lab.title!
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
112 results
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RNA microarray
pCHi-C
tissue
bone element
84
islet of Langerhans
4
thymus
2
Ammon's horn
1
adipose tissue
1
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