Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1031
total RNA-seq
907
ChIP-seq
260
ATAC-seq
180
single cell RNA-seq
178
DNase-seq
87
RNA microarray
28
snATAC-seq
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
180
Transcription
Date released
107
August, 2021
90
February, 2021
47
September, 2023
9
April, 2020
6
April, 2018
3
December, 2019
3
May, 2023
1
February, 2023
1
May, 2022
Available data
111
tsv
97
txt
6
bam
6
bigWig
6
csv
6
fastq
Organism
266
Homo sapiens
Biosample type
267
tissue
187
primary cell
2
in vitro differentiated cells
Organ
93
heart
84
bone element
66
kidney
9
lung
6
blood vessel
6
pancreas
6
vasculature
2
artery
1
adipose tissue
1
connective tissue
1
epithelium
1
liver
1
musculature of body
Project
211
AMP
47
KPMP
9
LungMap
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
200
AMP-T2D consortium
47
KPMP
11
Katalin Susztak, Upenn
9
Xin Sun, UCSD
Audit category:
84
inconsistent ontology term
7
audit script error
assay_title!
WGBS
BIOSAMPLE
ASSAY
267 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
RNA microarray
tissue
bone element
84
kidney
64
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
+ See 18 more…
See all biosamples
Download