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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1659
ChIP-seq
1290
total RNA-seq
418
ATAC-seq
275
single cell RNA-seq
212
DNase-seq
87
RNA microarray
40
pCHi-C
28
WGBS
27
Hi-C
21
RRBS
18
small RNA-seq
8
snATAC-seq
5
FAIRE-seq
5
GRO-seq
3
snDrop-seq
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
Assay category
8
DNA accessibility
Date released
84
February, 2021
7
August, 2021
2
December, 2019
1
August, 2022
1
May, 2022
Available data
85
txt
2
tsv
1
bed bed3+
Organism
94
Homo sapiens
Biosample type
95
tissue
Organ
84
bone element
8
kidney
1
adipose tissue
1
connective tissue
1
epithelium
1
musculature of body
1
pancreas
Project
95
AMP
Genome assembly (visualization)
1
hg19
Lab
89
AMP-T2D consortium
48
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
6
Katalin Susztak, Upenn
0
KPMP
Audit category:
84
inconsistent ontology term
4
audit script error
BIOSAMPLE
ASSAY
95 results
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RNA microarray
snATAC-seq
tissue
bone element
84
kidney
6
islet of Langerhans
1
kidney interstitium
1
renal glomerulus
1
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