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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1666
ChIP-seq
993
total RNA-seq
431
ATAC-seq
301
single cell RNA-seq
122
DNase-seq
84
RNA microarray
78
snATAC-seq
69
WGBS
50
pCHi-C
32
Hi-C
16
RRBS
14
small RNA-seq
10
MeRIP-seq
5
GRO-seq
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
16
DNA methylation
Date released
10
July, 2019
6
August, 2017
Available data
14
bed bedMethyl
14
bigBed bedMethyl
4
fastq
Organism
16
Homo sapiens
Biosample type
10
tissue
6
primary cell
Organ
6
epithelium
5
musculature of body
kidney
2
brain
2
heart
2
liver
2
pancreas
connective tissue
1
eye
1
pericardium
1
vasculature
Project
16
AMP
Genome assembly (visualization)
14
hg19
Lab
16
AMP-T2D consortium
assay_title!
Capture-C
organ_slims!
connective tissue
kidney
BIOSAMPLE
ASSAY
16 results
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RRBS
tissue
skeletal muscle tissue
4
brain
1
heart left ventricle
1
islet of Langerhans
1
liver
1
+ See 2 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
hepatocyte
1
retinal pigment epithelial cell
1
skeletal muscle cell
1
+ See 1 more…
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