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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1345
ChIP-seq
1182
total RNA-seq
318
ATAC-seq
single cell RNA-seq
178
DNase-seq
87
RNA microarray
39
pCHi-C
24
Hi-C
19
WGBS
18
snATAC-seq
16
small RNA-seq
10
MeRIP-seq
6
RRBS
5
GRO-seq
5
STARR-seq
4
Capture-C
3
FAIRE-seq
3
snDrop-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
6
DNA methylation
Date released
6
July, 2019
August, 2017
Available data
6
bed bedMethyl
6
bigBed bedMethyl
Organism
6
Homo sapiens
Biosample type
primary cell
6
tissue
Organ
2
pancreas
1
brain
1
heart
1
kidney
1
pericardium
Project
6
AMP
Genome assembly (visualization)
6
hg19
Lab
6
AMP-T2D consortium
assay_title!
single cell RNA-seq
award.project!
T1D
biosample_type!
primary cell
month_released!
August, 2017
BIOSAMPLE
ASSAY
6 results
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RRBS
tissue
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
pancreas
1
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