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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
771
ChIP-seq
237
total RNA-seq
134
single cell RNA-seq
59
ATAC-seq
27
snATAC-seq
17
WGBS
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
DNase-seq
1
Hi-C
1
pCHi-C
Assay category
237
Transcription
4
DNA methylation
Date released
93
August, 2017
76
February, 2023
26
September, 2018
16
September, 2020
15
February, 2018
6
May, 2022
5
January, 2019
2
July, 2018
2
October, 2018
Available data
1315
tsv
1282
bam
1278
bigWig
241
fastq
59
txt
19
bed bedMethyl
19
bigBed bedMethyl
2
bed bed3+
Organism
241
Homo sapiens
Biosample type
121
primary cell
100
tissue
15
in vitro differentiated cells
5
cell line
Organ
178
pancreas
81
epithelium
6
liver
4
embryo
2
musculature of body
Project
149
AMP
92
HPAP
Genome assembly (visualization)
143
hg19
139
GRCh38
Lab
143
AMP-T2D consortium
92
Klaus Kaestner, Upenn
6
Kyle Gaulton, UCSD
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
241 results
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total RNA-seq
RRBS
primary cell
pancreatic alpha cell
52
exocrine cell
39
pancreatic beta cell
21
pancreatic acinar cell
4
pancreatic ductal cell
4
+ See 1 more…
tissue
islet of Langerhans
97
skeletal muscle tissue
2
liver
1
in vitro differentiated cells
pancreatic endoderm
4
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
posterior foregut
2
+ See 2 more…
cell line
HepG2
5
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