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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1414total RNA-seq
  • 1387ChIP-seq
  • 502ATAC-seq
  • 369single cell RNA-seq
  • 210DNase-seq
  • 87RNA microarray
  • 84snATAC-seq
  • 74WGBS
  • 51pCHi-C
  • 30Hi-C
  • 21RRBS
  • 18small RNA-seq
  • 5FAIRE-seq
  • 5GRO-seq
  • 4MeRIP-seq
  • 3snDrop-seq
  • 2Capture-C
  • 1CRISPR RNA-seq
  • 1CRISPRi RNA-seq
  • 1DNAme array
Assay category
  • 21DNA methylation
Date released
  • 15July, 2019
  • 6August, 2017
Available data
  • 19bed bedMethyl
  • 19bigBed bedMethyl
  • 4fastq
Organism
  • 21Homo sapiens
Biosample type
  • 11tissue
  • 10primary cell
Organ
  • 6epithelium
  • 5musculature of body
  • 4kidney
  • 2brain
  • 2heart
  • 2liver
  • 2pancreas
  • 1connective tissue
  • 1eye
  • 1pericardium
  • 1vasculature
Project
  • 21AMP
Genome assembly (visualization)
  • 19hg19
Lab
  • 21AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
biosample_type!
  • cell line
BIOSAMPLE
ASSAY

21 results

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RRBS
tissue
skeletal muscle tissue4
brain1
heart left ventricle1
islet of Langerhans1
kidney1
primary cell
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
hepatocyte1
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