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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1163
total RNA-seq
829
ChIP-seq
302
ATAC-seq
176
single cell RNA-seq
170
DNase-seq
87
RNA microarray
35
pCHi-C
27
snATAC-seq
23
Hi-C
17
WGBS
16
small RNA-seq
10
MeRIP-seq
8
RRBS
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
FAIRE-seq
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
8
DNA methylation
Date released
6
July, 2019
2
August, 2017
Available data
9
bed bedMethyl
9
bigBed bedMethyl
fastq
Organism
8
Homo sapiens
Biosample type
primary cell
8
tissue
Organ
2
musculature of body
2
pancreas
1
brain
1
heart
1
kidney
1
pericardium
Project
8
AMP
Genome assembly (visualization)
6
hg19
Lab
8
AMP-T2D consortium
biosample_type!
primary cell
stem cell
files.file_type!
fastq
month_released!
August, 2022
BIOSAMPLE
ASSAY
8 results
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RRBS
tissue
skeletal muscle tissue
2
brain
1
heart left ventricle
1
islet of Langerhans
1
kidney
1
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