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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1290total RNA-seq
  • 1014ChIP-seq
  • 470ATAC-seq
  • 235single cell RNA-seq
  • 200DNase-seq
  • 87RNA microarray
  • 58WGBS
  • 57snATAC-seq
  • 56pCHi-C
  • 33Hi-C
  • 18small RNA-seq
  • 17RRBS
  • 10MeRIP-seq
  • 5STARR-seq
  • 4Capture-C
  • 3CRISPR genome editing followed by DNA sequencing
  • 3FAIRE-seq
  • 3snDrop-seq
  • 2HiChIP
  • 1CRISPR RNA-seq
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1CRISPRi RNA-seq
  • 1DNAme array
  • 1MPRA
  • 1shRNA RNA-seq
  • 1siRNA RNA-seq
  • 1whole genome sequencing assay
Assay category
  • 17DNA methylation
Date released
  • 15July, 2019
  • 2August, 2017
Available data
  • 19bed bedMethyl
  • 19bigBed bedMethyl
  • fastq
Organism
  • 17Homo sapiens
Biosample type
  • 9primary cell
  • 8tissue
Organ
  • 6epithelium
  • 4kidney
  • 3musculature of body
  • 2brain
  • 2heart
  • 2pancreas
  • 1connective tissue
  • 1eye
  • 1liver
  • 1pericardium
  • 1vasculature
Project
  • 17AMP
Genome assembly (visualization)
  • 15hg19
Lab
  • 17AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
files.file_type!
  • fastq
BIOSAMPLE
ASSAY

17 results

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RRBS
primary cell
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
hepatocyte1
tissue
skeletal muscle tissue2
brain1
heart left ventricle1
islet of Langerhans1
kidney1
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