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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 755ChIP-seq
  • 241total RNA-seq
  • 195ATAC-seq
  • 95single cell RNA-seq
  • 49DNase-seq
  • 49pCHi-C
  • 19Hi-C
  • 19RRBS
  • 12snATAC-seq
  • 11small RNA-seq
  • 10MeRIP-seq
  • 8WGBS
  • 4FAIRE-seq
  • 4STARR-seq
  • 3CRISPR genome editing followed by DNA sequencing
  • 2Capture-C
  • 2snDrop-seq
  • 1DNAme array
Assay category
  • 19DNA methylation
Date released
  • 15July, 2019
  • 4August, 2017
Available data
  • 19bed bedMethyl
  • 19bigBed bedMethyl
  • 4fastq
Organism
  • 19Homo sapiens
Biosample type
  • 10primary cell
  • 9tissue
Organ
  • 6epithelium
  • 4kidney
  • 3musculature of body
  • 2brain
  • 2heart
  • 2liver
  • 2pancreas
  • 1connective tissue
  • 1eye
  • 1pericardium
  • 1vasculature
Project
  • 19AMP
Genome assembly (visualization)
  • 19hg19
Lab
  • 19AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

19 results

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RRBS
primary cell
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
hepatocyte1
tissue
skeletal muscle tissue2
brain1
heart left ventricle1
islet of Langerhans1
kidney1
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