Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1812
ChIP-seq
1397
total RNA-seq
425
ATAC-seq
360
single cell RNA-seq
208
DNase-seq
84
snATAC-seq
75
WGBS
48
pCHi-C
29
Hi-C
19
RRBS
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
4
MeRIP-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
siRNA RNA-seq
1
whole genome sequencing assay
Date released
4
August, 2021
Organism
4
Homo sapiens
Biosample type
4
cell line
Organ
2
kidney
2
liver
Project
4
AMP
Lab
4
Bing Ren, UCSD
Audit category:
inconsistent ontology term
assay_title!
siRNA RNA-seq
audit.ERROR.category!
inconsistent ontology term
files.file_type!
xls
BIOSAMPLE
ASSAY
4 results
search-icon
table-tab-icon
Clear Filters
STARR-seq
cell line
HEK293T
2
HepG2
2