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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1694
ChIP-seq
1340
total RNA-seq
414
ATAC-seq
287
single cell RNA-seq
128
DNase-seq
75
WGBS
68
snATAC-seq
48
pCHi-C
28
Hi-C
17
small RNA-seq
16
RRBS
5
GRO-seq
4
FAIRE-seq
4
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
HiChIP
2
STARR-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
RNA microarray
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
2
August, 2021
Organism
2
Homo sapiens
Biosample type
2
cell line
Organ
kidney
2
liver
Project
2
AMP
Lab
2
Bing Ren, UCSD
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
lab.title!
Xin Sun, UCSD
organ_slims!
kidney
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
2 results
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STARR-seq
cell line
HepG2
2