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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1554
ChIP-seq
1069
total RNA-seq
333
ATAC-seq
236
single cell RNA-seq
195
DNase-seq
87
RNA microarray
73
snATAC-seq
55
pCHi-C
22
WGBS
20
Hi-C
19
RRBS
16
small RNA-seq
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
FAIRE-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
22
DNA methylation
Date released
10
July, 2019
9
August, 2017
3
November, 2018
Available data
12
bam
12
bed bedMethyl
12
bigBed bedMethyl
12
bigWig
7
fastq
Organism
22
Homo sapiens
Biosample type
21
tissue
1
cell line
Organ
pancreas
47
epithelium
8
heart
6
adipose tissue
6
connective tissue
5
liver
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Project
22
AMP
Genome assembly (visualization)
12
GRCh38
Lab
22
AMP-T2D consortium
assay_title!
GRO-seq
month_released!
September, 2023
organ_slims!
blood vessel
pancreas
BIOSAMPLE
ASSAY
22 results
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WGBS
tissue
heart left ventricle
4
adipose tissue
3
liver
3
subcutaneous abdominal adipose tissue
3
heart right ventricle
2
+ See 5 more…
cell line
HepG2
1
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