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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
247
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
31
DNase-seq
17
pCHi-C
10
Hi-C
10
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
47
DNA methylation
Date released
41
May, 2022
16
May, 2021
7
February, 2021
Available data
41
zippedFastqFolder
6
fastq
6
tsv
1
bam
1
bed bed3+
Organism
64
Homo sapiens
Biosample type
64
primary cell
52
tissue
7
cell line
in vitro differentiated cells
4
stem cell
Organ
47
epithelium
47
pancreas
2
connective tissue
1
bone element
1
bone marrow
Project
47
HPAP
16
T1D
1
AMP
Genome assembly (visualization)
1
hg19
Lab
47
Klaus Kaestner, Upenn
16
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
in vitro differentiated cells
month_released!
August, 2022
BIOSAMPLE
ASSAY
64 results
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WGBS
pCHi-C
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
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