Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
474
total RNA-seq
153
ChIP-seq
25
ATAC-seq
9
DNase-seq
6
WGBS
5
pCHi-C
4
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Assay category
6
DNA methylation
Date released
6
August, 2017
2
March, 2020
1
August, 2018
1
February, 2021
1
May, 2021
Available data
4
fastq
3
bam
2
bed bedMethyl
2
bigBed bedMethyl
2
bigWig
2
tsv
1
bed bed3+
1
bedpe bed3+
Organism
11
Homo sapiens
Biosample type
7
tissue
2
primary cell
1
in vitro differentiated cells
1
stem cell
Organ
52
pancreas
47
epithelium
11
connective tissue
11
heart
8
adipose tissue
8
liver
4
eye
3
blood vessel
3
spleen
3
vasculature
2
brain
2
intestine
2
kidney
2
musculature of body
2
thymus
1
adrenal gland
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
limb
1
lung
1
mammary gland
1
ovary
1
small intestine
1
stomach
1
urinary bladder
Project
10
AMP
1
T1D
Genome assembly (visualization)
2
GRCh38
1
hg19
Lab
10
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
11 results
search-icon
table-tab-icon
Clear Filters
WGBS
pCHi-C
tissue
adipose tissue
3
1
subcutaneous abdominal adipose tissue
3
primary cell
adult endothelial progenitor cell
1
osteoblast
1
in vitro differentiated cells
white fat cell
1
stem cell
mesenchymal stem cell
1
Download