Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
247
total RNA-seq
200
ATAC-seq
187
single cell RNA-seq
56
snATAC-seq
47
WGBS
31
DNase-seq
17
pCHi-C
10
Hi-C
10
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
187
Transcription
47
DNA methylation
Target of assay
3
control
Date released
74
May, 2022
48
July, 2018
43
April, 2018
40
September, 2020
18
February, 2021
3
August, 2018
3
July, 2019
3
June, 2018
1
November, 2018
1
September, 2018
Available data
134
fastq
106
tsv
100
bam
100
bigWig
93
zippedFastqFolder
2
csv
Organism
234
Homo sapiens
Biosample type
234
primary cell
207
tissue
2
in vitro differentiated cells
1
cell line
Organ
121
pancreas
117
epithelium
4
connective tissue
3
brain
Project
132
HPAP
102
AMP
Genome assembly (visualization)
100
GRCh38
100
hg19
Lab
132
Klaus Kaestner, Upenn
102
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
assay_title!
shRNA RNA-seq
BIOSAMPLE
ASSAY
234 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
WGBS
primary cell
Langerhans cell
85
pancreatic alpha cell
12
31
pancreatic beta cell
12
16
pancreatic acinar cell
12
pancreatic delta cell
11
+ See 14 more…
See all biosamples
Download