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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
344
total RNA-seq
218
ChIP-seq
103
ATAC-seq
80
single cell RNA-seq
11
snATAC-seq
10
MeRIP-seq
8
DNase-seq
6
Hi-C
4
WGBS
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
Assay category
4
DNA methylation
2
Transcription
Date released
4
November, 2018
2
July, 2019
Available data
6
bam
6
bigWig
4
bed bedMethyl
4
bigBed bedMethyl
4
fastq
2
tsv
Organism
6
Homo sapiens
Biosample type
6
tissue
Organ
9
adipose tissue
9
connective tissue
9
heart
8
liver
6
pancreas
4
brain
3
musculature of body
2
blood vessel
2
spleen
2
vasculature
1
kidney
1
limb
Project
HPAP
6
AMP
Genome assembly (visualization)
6
GRCh38
2
hg19
Lab
6
AMP-T2D consortium
award.project!
HPAP
organ_slims!
small intestine
BIOSAMPLE
ASSAY
6 results
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WGBS
small RNA-seq
tissue
body of pancreas
2
2
pancreas
2
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