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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1414total RNA-seq
  • 1387ChIP-seq
  • 502ATAC-seq
  • 369single cell RNA-seq
  • 210DNase-seq
  • 87RNA microarray
  • 84snATAC-seq
  • 74WGBS
  • 51pCHi-C
  • 30Hi-C
  • 21RRBS
  • 18small RNA-seq
  • 5FAIRE-seq
  • 5GRO-seq
  • 4MeRIP-seq
  • 3snDrop-seq
  • 2Capture-C
  • 1CRISPR RNA-seq
  • 1CRISPRi RNA-seq
  • 1DNAme array
Assay category
  • 74DNA methylation
Date released
  • 41May, 2022
  • 12July, 2019
  • 9August, 2017
  • 6February, 2021
  • 6November, 2018
Available data
  • 41zippedFastqFolder
  • 17bam
  • 16bed bedMethyl
  • 16bigBed bedMethyl
  • 16bigWig
  • 16fastq
  • 6tsv
Organism
  • 74Homo sapiens
Biosample type
  • 47primary cell
  • 27tissue
  • cell line
Organ
  • 51pancreas
  • 47epithelium
  • 8heart
  • 6adipose tissue
  • 6connective tissue
  • 4liver
  • 2blood vessel
  • 2spleen
  • 2vasculature
  • 1limb
  • 1musculature of body
Project
  • 47HPAP
  • 27AMP
Genome assembly (visualization)
  • 16GRCh38
Lab
  • 47Klaus Kaestner, Upenn
  • 27AMP-T2D consortium
biosample_type!
  • cell line
BIOSAMPLE
ASSAY

74 results

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Clear Filters
WGBS
primary cell
pancreatic alpha cell31
pancreatic beta cell16
tissue
heart left ventricle4
adipose tissue3
liver3
subcutaneous abdominal adipose tissue3
aorta2
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