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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 964ChIP-seq
  • 496total RNA-seq
  • 271ATAC-seq
  • 189single cell RNA-seq
  • 56snATAC-seq
  • 48WGBS
  • 34DNase-seq
  • 32pCHi-C
  • 18Hi-C
  • 10RRBS
  • 6MeRIP-seq
  • 5GRO-seq
  • 5STARR-seq
  • 4Capture-C
  • 3CRISPR genome editing followed by DNA sequencing
  • 2HiChIP
  • 2small RNA-seq
  • 1CRISPR RNA-seq
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1CRISPRi RNA-seq
  • 1DNAme array
  • 1FAIRE-seq
  • 1MPRA
  • 1shRNA RNA-seq
  • 1siRNA RNA-seq
  • 1whole genome sequencing assay
Assay category
  • 48DNA methylation
Date released
  • 41May, 2022
  • 6February, 2021
  • 1November, 2018
Available data
  • 41zippedFastqFolder
  • 7fastq
  • 6tsv
  • 1bam
  • 1bed bedMethyl
  • 1bigBed bedMethyl
  • 1bigWig
Organism
  • 48Homo sapiens
Biosample type
  • 47primary cell
  • tissue
  • 1cell line
Organ
  • 47epithelium
  • 47pancreas
  • 1liver
Project
  • 47HPAP
  • 1AMP
Genome assembly (visualization)
  • 1GRCh38
Lab
  • 47Klaus Kaestner, Upenn
  • 1AMP-T2D consortium
biosample_type!
  • tissue
BIOSAMPLE
ASSAY

48 results

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WGBS
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pancreatic alpha cell31
pancreatic beta cell16
cell line
HepG21
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