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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
252
ChIP-seq
242
ATAC-seq
187
total RNA-seq
162
single cell RNA-seq
86
RNA microarray
84
snATAC-seq
53
pCHi-C
23
Hi-C
13
RRBS
8
WGBS
5
GRO-seq
5
STARR-seq
4
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
DNase-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
8
DNA methylation
Date released
7
August, 2017
1
July, 2019
Available data
bam
11
bed bedMethyl
11
bigBed bedMethyl
11
bigWig
11
fastq
Organism
8
Homo sapiens
Biosample type
8
tissue
Organ
epithelium
47
pancreas
4
adipose tissue
4
connective tissue
4
liver
heart
Project
8
AMP
Lab
8
AMP-T2D consortium
files.file_type!
bam
csv
organ_slims!
epithelium
heart
BIOSAMPLE
ASSAY
8 results
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WGBS
tissue
liver
3
subcutaneous abdominal adipose tissue
3
adipose tissue
1
right lobe of liver
1
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