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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 356ATAC-seq
  • 293ChIP-seq
  • 263single cell RNA-seq
  • 245total RNA-seq
  • 87RNA microarray
  • 84snATAC-seq
  • 57WGBS
  • 56pCHi-C
  • 34Hi-C
  • 21RRBS
  • 10MeRIP-seq
  • 5GRO-seq
  • 5STARR-seq
  • 4Capture-C
  • 3CRISPR genome editing followed by DNA sequencing
  • 3DNase-seq
  • 3snDrop-seq
  • 2HiChIP
  • 1CRISPR RNA-seq
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1CRISPRi RNA-seq
  • 1DNAme array
  • 1MPRA
  • 1shRNA RNA-seq
  • 1siRNA RNA-seq
  • 1whole genome sequencing assay
Assay category
  • 57DNA methylation
Date released
  • 41May, 2022
  • 7August, 2017
  • 6February, 2021
  • 3July, 2019
Available data
  • 41zippedFastqFolder
  • bam
  • 17bed bedMethyl
  • 17bigBed bedMethyl
  • 17bigWig
  • 17fastq
  • 6tsv
Organism
  • 57Homo sapiens
Biosample type
  • 47primary cell
  • 10tissue
Organ
  • 47epithelium
  • 47pancreas
  • 4adipose tissue
  • 4connective tissue
  • 4liver
  • 2heart
Project
  • 47HPAP
  • 10AMP
Lab
  • 47Klaus Kaestner, Upenn
  • 10AMP-T2D consortium
files.file_type!
  • bam
BIOSAMPLE
ASSAY

57 results

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WGBS
primary cell
pancreatic alpha cell31
pancreatic beta cell16
tissue
liver3
subcutaneous abdominal adipose tissue3
heart left ventricle2
adipose tissue1
right lobe of liver1
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