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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1102
total RNA-seq
802
ChIP-seq
312
ATAC-seq
200
DNase-seq
117
single cell RNA-seq
87
RNA microarray
39
pCHi-C
25
Hi-C
18
small RNA-seq
17
RRBS
17
WGBS
3
FAIRE-seq
3
snDrop-seq
2
Capture-C
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
Assay category
17
DNA methylation
Date released
12
July, 2019
5
August, 2017
Available data
11
bam
10
bed bedMethyl
10
bigBed bedMethyl
10
bigWig
fastq
Organism
17
Homo sapiens
Biosample type
17
tissue
Organ
8
heart
3
adipose tissue
3
connective tissue
3
liver
2
blood vessel
2
vasculature
1
limb
1
musculature of body
Project
17
AMP
Genome assembly (visualization)
8
GRCh38
Lab
41
Klaus Kaestner, Upenn
17
AMP-T2D consortium
files.file_type!
bedpe
fastq
month_released!
November, 2018
BIOSAMPLE
ASSAY
17 results
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WGBS
tissue
heart left ventricle
4
subcutaneous abdominal adipose tissue
3
aorta
2
heart right ventricle
2
liver
2
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