Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1769
ChIP-seq
1466
total RNA-seq
485
ATAC-seq
363
single cell RNA-seq
201
DNase-seq
87
RNA microarray
84
snATAC-seq
57
WGBS
54
pCHi-C
29
Hi-C
18
small RNA-seq
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
2
RRBS
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
1
whole genome sequencing assay
Assay category
57
DNA methylation
Date released
41
May, 2022
7
August, 2017
6
February, 2021
3
July, 2019
Available data
41
zippedFastqFolder
17
fastq
16
bam
16
bed bedMethyl
bigBed bedMethyl
16
bigWig
6
tsv
Organism
57
Homo sapiens
Biosample type
47
primary cell
10
tissue
Organ
47
epithelium
47
pancreas
4
adipose tissue
4
connective tissue
4
liver
2
heart
1
blood vessel
vasculature
Project
47
HPAP
10
AMP
Lab
47
Klaus Kaestner, Upenn
10
AMP-T2D consortium
files.file_type!
bigBed bedMethyl
lab.title!
Anna Gloyn, Oxford
organ_slims!
thymus
vasculature
BIOSAMPLE
ASSAY
57 results
search-icon
table-tab-icon
Clear Filters
WGBS
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
tissue
liver
3
subcutaneous abdominal adipose tissue
3
heart left ventricle
2
adipose tissue
1
right lobe of liver
1
Download