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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1708ChIP-seq
  • 1397total RNA-seq
  • 432ATAC-seq
  • 284single cell RNA-seq
  • 202DNase-seq
  • 87RNA microarray
  • 56pCHi-C
  • 36snATAC-seq
  • 33Hi-C
  • 23WGBS
  • 21RRBS
  • 18small RNA-seq
  • 10MeRIP-seq
  • 5FAIRE-seq
  • 5GRO-seq
  • 5STARR-seq
  • 4Capture-C
  • 3CRISPR genome editing followed by DNA sequencing
  • 3snDrop-seq
  • 2HiChIP
  • 1CRISPR RNA-seq
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1CRISPRi RNA-seq
  • 1DNAme array
  • 1MPRA
  • 1shRNA RNA-seq
  • 1siRNA RNA-seq
  • 1whole genome sequencing assay
Assay category
  • 23DNA methylation
Date released
  • 12July, 2019
  • 9August, 2017
  • 2November, 2018
Available data
  • 13bam
  • 12bed bedMethyl
  • 12bigBed bedMethyl
  • 12bigWig
  • 6fastq
Organism
  • 23Homo sapiens
Biosample type
  • 23tissue
Organ
  • 8heart
  • 6adipose tissue
  • 6connective tissue
  • 4liver
  • 2blood vessel
  • 2pancreas
  • 2vasculature
  • 1limb
  • 1musculature of body
Project
  • 23AMP
Genome assembly (visualization)
  • 12GRCh38
Lab
  • 23AMP-T2D consortium
files.run_type!
  • paired-ended
BIOSAMPLE
ASSAY

23 results

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Clear Filters
WGBS
tissue
heart left ventricle4
adipose tissue3
liver3
subcutaneous abdominal adipose tissue3
aorta2
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