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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
406
total RNA-seq
237
ChIP-seq
148
ATAC-seq
80
single cell RNA-seq
51
WGBS
11
snATAC-seq
10
MeRIP-seq
8
DNase-seq
8
Hi-C
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
GRO-seq
Assay category
51
DNA methylation
Date released
41
May, 2022
6
February, 2021
4
November, 2018
Available data
41
zippedFastqFolder
10
fastq
6
tsv
4
bam
4
bed bedMethyl
4
bigBed bedMethyl
4
bigWig
Organism
51
Homo sapiens
Biosample type
47
primary cell
4
tissue
Organ
51
pancreas
47
epithelium
8
heart
6
adipose tissue
6
connective tissue
5
liver
2
blood vessel
spleen
2
vasculature
1
limb
1
musculature of body
0
embryo
Project
47
HPAP
4
AMP
Genome assembly (visualization)
4
GRCh38
Lab
47
Klaus Kaestner, Upenn
4
AMP-T2D consortium
month_released!
March, 2020
organ_slims!
spleen
BIOSAMPLE
ASSAY
51 results
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WGBS
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
tissue
body of pancreas
2
pancreas
2
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