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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1653ChIP-seq
  • 1130total RNA-seq
  • 379ATAC-seq
  • 289single cell RNA-seq
  • 204DNase-seq
  • 87RNA microarray
  • 74snATAC-seq
  • 56pCHi-C
  • 25Hi-C
  • 24WGBS
  • 19RRBS
  • 16small RNA-seq
  • 5GRO-seq
  • 5STARR-seq
  • 3CRISPR genome editing followed by DNA sequencing
  • 3FAIRE-seq
  • 3snDrop-seq
  • 2Capture-C
  • 2HiChIP
  • 1CRISPR RNA-seq
  • 1CRISPRi RNA-seq
  • 1DNAme array
  • 1MPRA
  • 1shRNA RNA-seq
  • 1siRNA RNA-seq
  • 1whole genome sequencing assay
Assay category
  • 24DNA methylation
Date released
  • 12July, 2019
  • 9August, 2017
  • 3November, 2018
Available data
  • 14bam
  • 13bed bedMethyl
  • 13bigBed bedMethyl
  • 13bigWig
  • 7fastq
Organism
  • 24Homo sapiens
Biosample type
  • 23tissue
  • 1cell line
Organ
  • pancreas
  • 47epithelium
  • 8heart
  • 6adipose tissue
  • 6connective tissue
  • 5liver
  • 2blood vessel
  • 2spleen
  • 2vasculature
  • 1limb
  • 1musculature of body
Project
  • 24AMP
Genome assembly (visualization)
  • 13GRCh38
Lab
  • 24AMP-T2D consortium
organ_slims!
  • pancreas
BIOSAMPLE
ASSAY

24 results

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Clear Filters
WGBS
tissue
heart left ventricle4
adipose tissue3
liver3
subcutaneous abdominal adipose tissue3
aorta2
cell line
HepG21
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