Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 397total RNA-seq
  • 218ChIP-seq
  • 152ATAC-seq
  • 80single cell RNA-seq
  • 51WGBS
  • 11snATAC-seq
  • 10MeRIP-seq
  • 9Hi-C
  • 8DNase-seq
  • 2Capture-C
  • 2FAIRE-seq
  • 2RRBS
  • 2small RNA-seq
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1pCHi-C
Assay category
  • 51DNA methylation
Date released
  • 41May, 2022
  • 6February, 2021
  • 4November, 2018
Available data
  • 41zippedFastqFolder
  • 10fastq
  • 6tsv
  • 4bam
  • 4bed bedMethyl
  • 4bigBed bedMethyl
  • 4bigWig
Organism
  • 51Homo sapiens
Biosample type
  • 47primary cell
  • 4tissue
Organ
  • 51pancreas
  • 47epithelium
  • 8heart
  • 6adipose tissue
  • 6connective tissue
  • 5liver
  • 2blood vessel
  • 2spleen
  • 2vasculature
  • 1limb
  • 1musculature of body
Project
  • 47HPAP
  • 4AMP
Genome assembly (visualization)
  • 4GRCh38
Lab
  • 47Klaus Kaestner, Upenn
  • 4AMP-T2D consortium
BIOSAMPLE
ASSAY

51 results

search-icontable-tab-icon
Clear Filters
WGBS
primary cell
pancreatic alpha cell31
pancreatic beta cell16
tissue
body of pancreas2
pancreas2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego