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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
785
ChIP-seq
156
total RNA-seq
68
single cell RNA-seq
29
ATAC-seq
27
snATAC-seq
12
DNase-seq
11
WGBS
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
68
Transcription
Date released
22
September, 2020
15
April, 2018
15
July, 2018
12
February, 2021
2
June, 2018
1
August, 2018
1
November, 2018
1
September, 2018
Available data
172
tsv
69
fastq
52
zippedFastqFolder
37
bam
36
bigWig
13
txt
8
csv
3
bedpe bed3+
2
bed bed3+
2
ibed
Organism
69
Homo sapiens
Biosample type
62
primary cell
6
tissue
1
in vitro differentiated cells
Organ
75
pancreas
epithelium
4
connective tissue
1
adipose tissue
Project
35
AMP
34
HPAP
Genome assembly (visualization)
32
GRCh38
32
hg19
Lab
35
AMP-T2D consortium
34
Klaus Kaestner, Upenn
Audit category:
6
inconsistent ontology term
assay_title!
snDrop-seq
organ_slims!
epithelium
BIOSAMPLE
ASSAY
69 results
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single cell RNA-seq
pCHi-C
primary cell
Langerhans cell
34
pancreatic cell
9
mesenchymal cell
6
pancreatic stellate cell
3
co-expressing pancreatic endocrine cell
2
+ See 4 more…
tissue
islet of Langerhans
6
in vitro differentiated cells
white fat cell
1
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