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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
115
total RNA-seq
34
ATAC-seq
18
snATAC-seq
17
pCHi-C
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
Assay category
18
DNA accessibility
Date released
17
May, 2021
16
January, 2021
2
February, 2023
Organism
35
Homo sapiens
Biosample type
24
primary cell
11
tissue
Organ
10
pancreas
8
blood
8
bodily fluid
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
35
T1D
Lab
48
Klaus Kaestner, Upenn
42
AMP-T2D consortium
35
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
6
Katalin Susztak, Upenn
Audit category:
1
inconsistent ontology term
assay_title!
WGBS
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
35 results
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snATAC-seq
pCHi-C
primary cell
peripheral blood mononuclear cell
8
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
+ See 11 more…
tissue
islet of Langerhans
6
pancreas
4
thymus
1
See all biosamples