Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1031
total RNA-seq
907
ChIP-seq
260
ATAC-seq
178
DNase-seq
171
single cell RNA-seq
87
RNA microarray
27
WGBS
23
pCHi-C
18
snATAC-seq
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
18
DNA accessibility
Date released
19
March, 2020
8
January, 2021
6
August, 2021
4
October, 2019
2
February, 2023
1
August, 2022
1
May, 2022
Available data
19
tsv
1
bed bed3+
1
txt
Organism
41
Homo sapiens
Biosample type
73
primary cell
41
tissue
6
cell line
5
in vitro differentiated cells
4
stem cell
Organ
12
pancreas
6
kidney
4
eye
3
heart
2
brain
2
intestine
2
musculature of body
thymus
1
adipose tissue
1
adrenal gland
1
blood vessel
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
liver
1
lung
1
ovary
1
small intestine
1
spleen
1
stomach
1
urinary bladder
1
vasculature
Project
31
AMP
10
T1D
Genome assembly (visualization)
1
hg19
Lab
25
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Xin Sun, UCSD
6
Katalin Susztak, Upenn
Audit category:
2
audit script error
2
inconsistent ontology term
lab.title!
Xin Sun, UCSD
organ_slims!
thymus
BIOSAMPLE
ASSAY
41 results
search-icon
table-tab-icon
Clear Filters
pCHi-C
snATAC-seq
tissue
islet of Langerhans
4
7
kidney
6
pancreas
1
4
Ammon's horn
1
adipose tissue
1
+ See 17 more…
See all biosamples
Download