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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 484ChIP-seq
  • 113total RNA-seq
  • 29ATAC-seq
  • 6MeRIP-seq
  • 6pCHi-C
  • 5STARR-seq
  • 4Hi-C
  • 3CRISPR genome editing followed by DNA sequencing
  • 2Capture-C
  • 2DNase-seq
  • 2HiChIP
  • 1CRISPR genome editing followed by sgRNA sequencing
  • 1MPRA
  • 1WGBS
  • 1shRNA RNA-seq
  • 1siRNA RNA-seq
  • 1whole genome sequencing assay
Date released
  • 4March, 2020
  • 1February, 2021
  • 1May, 2020
Available data
  • 5tsv
  • 1bed bed3+
Organism
  • 6Homo sapiens
Biosample type
  • 25tissue
  • 17primary cell
  • 6cell line
  • 5in vitro differentiated cells
  • 4stem cell
Organ
  • 2kidney
  • 2liver
  • 1mammary gland
Project
  • 6AMP
Genome assembly (visualization)
  • 1hg19
Lab
  • 6AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
BIOSAMPLE
ASSAY

6 results

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pCHi-C
cell line
HepG22
MCF-71
RCC 7860 VHL1
RCC 7860 vector1
fibroblast cell line1
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