Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1261
total RNA-seq
968
ChIP-seq
456
ATAC-seq
364
single cell RNA-seq
177
DNase-seq
87
RNA microarray
84
snATAC-seq
74
WGBS
40
pCHi-C
23
Hi-C
19
RRBS
14
small RNA-seq
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
1
DNAme array
Date released
18
March, 2020
17
May, 2021
4
October, 2019
1
February, 2021
Available data
18
tsv
1
bam
1
bed bed3+
Organism
40
Homo sapiens
Biosample type
23
tissue
17
primary cell
6
cell line
5
in vitro differentiated cells
4
stem cell
Organ
4
eye
3
connective tissue
3
heart
brain
2
intestine
2
thymus
1
adipose tissue
1
adrenal gland
1
blood vessel
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
liver
1
lung
1
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
stomach
1
urinary bladder
1
vasculature
Project
23
AMP
17
T1D
Genome assembly (visualization)
1
hg19
Lab
23
AMP-T2D consortium
17
Kyle Gaulton, UCSD
Audit category:
3
inconsistent ontology term
organ_slims!
brain
BIOSAMPLE
ASSAY
40 results
search-icon
table-tab-icon
Clear Filters
pCHi-C
tissue
islet of Langerhans
4
thymus
2
adipose tissue
1
adrenal gland
1
aorta
1
+ See 14 more…
primary cell
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
+ See 11 more…
See all biosamples
Download