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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
181
ChIP-seq
105
ATAC-seq
89
single cell RNA-seq
28
pCHi-C
27
DNase-seq
11
small RNA-seq
9
Hi-C
5
snATAC-seq
4
MeRIP-seq
3
FAIRE-seq
2
Capture-C
2
snDrop-seq
1
DNAme array
Date released
23
March, 2020
4
May, 2021
1
February, 2021
Available data
23
tsv
1
bam
1
bed bed3+
Organism
28
Homo sapiens
Biosample type
20
tissue
5
primary cell
2
in vitro differentiated cells
1
stem cell
Organ
3
connective tissue
3
heart
2
brain
2
intestine
1
adipose tissue
1
adrenal gland
1
blood vessel
1
esophagus
1
gonad
1
large intestine
1
liver
1
lung
1
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
1
vasculature
Project
24
AMP
4
T1D
Genome assembly (visualization)
1
hg19
Lab
24
AMP-T2D consortium
4
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
28 results
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pCHi-C
tissue
Ammon's horn
1
adipose tissue
1
adrenal gland
1
aorta
1
bladder (urinary bladder)
1
+ See 15 more…
primary cell
CD8-positive, alpha-beta T cell
1
alternatively activated macrophage
1
macrophage
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
osteoblast
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
embryonic stem cell
1
stem cell
mesenchymal stem cell
1
See all biosamples
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