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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 190total RNA-seq
  • 181ChIP-seq
  • 105ATAC-seq
  • 89single cell RNA-seq
  • 28pCHi-C
  • 27DNase-seq
  • 11small RNA-seq
  • 9Hi-C
  • 5snATAC-seq
  • 4MeRIP-seq
  • 3FAIRE-seq
  • 2Capture-C
  • 2snDrop-seq
  • 1DNAme array
Date released
  • 23March, 2020
  • 4May, 2021
  • 1February, 2021
Available data
  • 23tsv
  • 1bam
  • 1bed bed3+
Organism
  • 28Homo sapiens
Biosample type
  • 20tissue
  • 5primary cell
  • 2in vitro differentiated cells
  • 1stem cell
Organ
  • 3connective tissue
  • 3heart
  • 2brain
  • 2intestine
  • 1adipose tissue
  • 1adrenal gland
  • 1blood vessel
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1liver
  • 1lung
  • 1musculature of body
  • 1ovary
  • 1pancreas
  • 1small intestine
  • 1spleen
  • 1stomach
  • 1thymus
  • 1urinary bladder
  • 1vasculature
Project
  • 24AMP
  • 4T1D
Genome assembly (visualization)
  • 1hg19
Lab
  • 24AMP-T2D consortium
  • 4Kyle Gaulton, UCSD
Audit category:
  • 4inconsistent ontology term
BIOSAMPLE
ASSAY

28 results

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pCHi-C
tissue
Ammon's horn1
adipose tissue1
adrenal gland1
aorta1
bladder (urinary bladder)1
primary cell
CD8-positive, alpha-beta T cell1
alternatively activated macrophage1
macrophage1
naive thymus-derived CD4-positive, alpha-beta T cell1
osteoblast1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)1
embryonic stem cell1
stem cell
mesenchymal stem cell1
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