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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
574
ChIP-seq
90
ATAC-seq
51
total RNA-seq
22
DNase-seq
21
pCHi-C
19
RRBS
10
Hi-C
8
WGBS
7
snATAC-seq
6
MeRIP-seq
6
single cell RNA-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
1
FAIRE-seq
Date released
13
May, 2021
6
March, 2020
1
February, 2021
1
May, 2020
Available data
5
tsv
2
bedpe bed3+
2
ibed
1
bed bed3+
Organism
21
Homo sapiens
Biosample type
12
primary cell
6
cell line
2
in vitro differentiated cells
1
tissue
Organ
2
kidney
2
liver
1
bone element
1
bone marrow
1
connective tissue
1
mammary gland
1
thymus
Project
13
T1D
8
AMP
Genome assembly (visualization)
3
hg19
Lab
13
Kyle Gaulton, UCSD
8
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
BIOSAMPLE
ASSAY
21 results
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pCHi-C
primary cell
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
erythroblast
1
+ See 6 more…
cell line
HepG2
2
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
fibroblast cell line
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
tissue
thymus
1
See all biosamples
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