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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
981
total RNA-seq
880
ChIP-seq
185
ATAC-seq
116
single cell RNA-seq
110
DNase-seq
85
RNA microarray
27
WGBS
25
pCHi-C
22
snATAC-seq
15
Hi-C
15
small RNA-seq
10
RRBS
4
MeRIP-seq
3
FAIRE-seq
0
shRNA RNA-seq
Assay category
981
Transcription
Date released
444
February, 2021
143
May, 2020
120
July, 2018
89
August, 2017
39
May, 2021
30
July, 2019
26
May, 2022
25
February, 2020
22
October, 2019
19
November, 2019
13
February, 2023
9
March, 2020
1
August, 2021
1
May, 2023
Available data
924
tsv
900
bam
894
bigWig
97
fastq
10
txt
Organism
981
Homo sapiens
Biosample type
981
tissue
241
primary cell
136
in vitro differentiated cells
110
cell line
Organ
455
connective tissue
397
adipose tissue
283
pancreas
170
liver
62
bone element
kidney
19
eye
17
brain
15
heart
7
blood vessel
7
limb
7
vasculature
5
musculature of body
5
nerve
4
skeleton
2
artery
2
epithelium
1
spinal cord
Project
974
AMP
7
T1D
Genome assembly (visualization)
895
GRCh38
895
hg19
Lab
948
AMP-T2D consortium
20
Karen Mohlke, UNC
12
Kyle Gaulton, UCSD
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
organ_slims!
kidney
BIOSAMPLE
ASSAY
981 results
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Clear Filters
total RNA-seq
tissue
adipose tissue
382
islet of Langerhans
292
liver
167
bone tissue
58
subcutaneous adipose tissue
7
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