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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
885
ChIP-seq
477
total RNA-seq
252
ATAC-seq
185
single cell RNA-seq
56
snATAC-seq
47
WGBS
28
pCHi-C
27
DNase-seq
17
Hi-C
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
FAIRE-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
small RNA-seq
1
whole genome sequencing assay
Assay category
2
Transcription
Date released
1
July, 2019
1
March, 2023
Available data
1
bam
1
bigWig
1
tsv
Organism
1
Homo sapiens
Biosample type
tissue
1
cell line
1
primary cell
Organ
1
adipose tissue
connective tissue
1
musculature of body
Project
1
AMP
1
community
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
1
AMP-T2D consortium
1
Anna Gloyn, Oxford
biosample_type!
tissue
files.file_type!
bed bedMethyl
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
2 results
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siRNA RNA-seq
small RNA-seq
cell line
EndoC-BH1
1
primary cell
skeletal muscle satellite cell
1
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