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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1824
ChIP-seq
976
total RNA-seq
508
ATAC-seq
350
single cell RNA-seq
179
DNase-seq
68
WGBS
56
snATAC-seq
52
pCHi-C
28
Hi-C
16
RRBS
16
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
17
Transcription
Date released
16
July, 2019
1
March, 2023
Available data
16
bam
16
bigWig
16
tsv
Organism
16
Homo sapiens
Biosample type
15
tissue
1
cell line
1
primary cell
Organ
4
brain
3
adipose tissue
3
connective tissue
3
liver
musculature of body
2
pancreas
1
heart
1
kidney
Project
16
AMP
1
community
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
16
AMP-T2D consortium
1
Anna Gloyn, Oxford
month_released!
February, 2021
organ_slims!
musculature of body
thymus
BIOSAMPLE
ASSAY
17 results
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small RNA-seq
siRNA RNA-seq
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
+ See 8 more…
cell line
EndoC-BH1
1
primary cell
mesenchymal stem cell of adipose
1
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