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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
246
total RNA-seq
199
ATAC-seq
175
single cell RNA-seq
41
WGBS
31
DNase-seq
29
snATAC-seq
16
pCHi-C
10
Hi-C
10
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Assay category
175
Transcription
Target of assay
3
control
Date released
48
July, 2018
43
April, 2018
40
September, 2020
33
May, 2022
February, 2021
3
August, 2018
3
July, 2019
3
June, 2018
1
November, 2018
1
September, 2018
Available data
116
fastq
100
bam
100
bigWig
100
tsv
52
zippedFastqFolder
2
csv
Organism
175
Homo sapiens
Biosample type
175
primary cell
174
tissue
2
in vitro differentiated cells
Organ
74
pancreas
70
epithelium
4
connective tissue
3
brain
Project
102
AMP
73
HPAP
Genome assembly (visualization)
100
GRCh38
100
hg19
Lab
102
AMP-T2D consortium
73
Klaus Kaestner, Upenn
Audit category:
7
inconsistent ontology term
assay_title!
CRISPR genome editing followed by sgRNA sequencing
month_released!
February, 2021
BIOSAMPLE
ASSAY
175 results
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single cell RNA-seq
primary cell
Langerhans cell
73
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
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