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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1031
total RNA-seq
907
ChIP-seq
258
ATAC-seq
180
single cell RNA-seq
178
DNase-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
180
Transcription
28
DNA accessibility
Date released
112
August, 2021
47
September, 2023
19
April, 2020
8
January, 2021
6
April, 2018
6
February, 2021
3
February, 2023
3
May, 2023
2
May, 2022
1
August, 2022
1
December, 2019
Available data
109
tsv
14
txt
6
bam
6
bigWig
6
csv
6
fastq
1
bed bed3+
Organism
207
Homo sapiens
Biosample type
243
primary cell
208
tissue
2
in vitro differentiated cells
Organ
93
heart
70
kidney
19
lung
17
pancreas
6
blood vessel
6
vasculature
2
artery
2
musculature of body
1
liver
Project
132
AMP
47
KPMP
19
LungMap
10
T1D
Genome assembly (visualization)
7
hg19
6
GRCh38
Lab
115
AMP-T2D consortium
47
KPMP
19
Xin Sun, UCSD
17
Katalin Susztak, Upenn
10
Kyle Gaulton, UCSD
Audit category:
7
audit script error
month_released!
January, 2018
BIOSAMPLE
ASSAY
208 results
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single cell RNA-seq
snATAC-seq
tissue
kidney
64
6
lung
9
10
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
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