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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1150
total RNA-seq
1140
ChIP-seq
223
ATAC-seq
203
DNase-seq
99
single cell RNA-seq
18
small RNA-seq
17
WGBS
2
Hi-C
Assay category
99
Transcription
Target of assay
3
control
Date released
49
April, 2018
42
July, 2018
3
August, 2018
3
July, 2019
2
June, 2018
Available data
99
bam
99
bigWig
99
tsv
91
fastq
Organism
99
Homo sapiens
Biosample type
93
primary cell
6
tissue
Organ
75
pancreas
69
epithelium
4
connective tissue
3
brain
Project
99
AMP
Genome assembly (visualization)
99
GRCh38
99
hg19
Lab
99
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
audit.NOT_COMPLIANT.category!
missing controlled_by
files.file_type!
zippedFastqFolder
BIOSAMPLE
ASSAY
99 results
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single cell RNA-seq
primary cell
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic acinar cell
11
pancreatic delta cell
11
pancreatic ductal cell
10
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tissue
islet of Langerhans
6
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