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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1152
total RNA-seq
1147
ChIP-seq
219
ATAC-seq
185
DNase-seq
57
single cell RNA-seq
23
Hi-C
19
RRBS
18
small RNA-seq
5
FAIRE-seq
2
pCHi-C
1
snATAC-seq
Assay category
57
Transcription
Target of assay
3
control
Date released
April, 2018
48
July, 2018
3
August, 2018
3
July, 2019
3
June, 2018
Available data
57
bam
57
bigWig
57
tsv
54
fastq
Organism
57
Homo sapiens
Biosample type
57
primary cell
Organ
41
pancreas
37
epithelium
3
brain
2
connective tissue
Project
57
AMP
Genome assembly (visualization)
57
GRCh38
57
hg19
Lab
57
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
biosample_type!
in vitro differentiated cells
month_released!
April, 2018
BIOSAMPLE
ASSAY
57 results
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single cell RNA-seq
primary cell
pancreatic alpha cell
9
pancreatic beta cell
9
pancreatic acinar cell
6
pancreatic cell
4
pancreatic delta cell
4
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