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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1163
total RNA-seq
1024
ChIP-seq
261
ATAC-seq
186
DNase-seq
58
single cell RNA-seq
19
RRBS
18
small RNA-seq
8
Hi-C
5
FAIRE-seq
2
Capture-C
2
pCHi-C
1
snATAC-seq
Assay category
58
Transcription
Target of assay
3
control
Date released
49
April, 2018
July, 2018
3
August, 2018
3
July, 2019
3
June, 2018
Available data
58
bam
58
bigWig
58
tsv
50
fastq
Organism
58
Homo sapiens
Biosample type
52
primary cell
6
tissue
Organ
43
pancreas
37
epithelium
3
brain
2
connective tissue
Project
58
AMP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
58
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bedpe bed3+
month_released!
July, 2018
November, 2017
BIOSAMPLE
ASSAY
58 results
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single cell RNA-seq
primary cell
pancreatic acinar cell
7
pancreatic delta cell
7
pancreatic ductal cell
7
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
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tissue
islet of Langerhans
6
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