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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1061
ChIP-seq
897
total RNA-seq
179
ATAC-seq
172
DNase-seq
26
single cell RNA-seq
17
RRBS
16
small RNA-seq
14
Hi-C
4
pCHi-C
2
Capture-C
2
FAIRE-seq
1
snATAC-seq
Assay category
26
Transcription
Target of assay
3
control
Date released
11
July, 2018
10
April, 2018
3
July, 2019
2
June, 2018
Available data
26
bam
26
bigWig
26
tsv
23
fastq
Organism
26
Homo sapiens
Biosample type
26
primary cell
Organ
pancreas
70
epithelium
4
connective tissue
3
brain
Project
26
AMP
Genome assembly (visualization)
26
GRCh38
26
hg19
Lab
26
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
blood vessel
pancreas
target.investigated_as!
other context
BIOSAMPLE
ASSAY
26 results
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single cell RNA-seq
primary cell
pancreatic cell
7
mesenchymal cell
6
cerebellar granule cell
2
endothelial cell
2
enteroendocrine cell
2
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