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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
685
ChIP-seq
249
total RNA-seq
71
ATAC-seq
15
pCHi-C
8
Hi-C
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
DNase-seq
2
HiChIP
2
single cell RNA-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
2
Transcription
Date released
2
December, 2019
Available data
2
tsv
Organism
2
Homo sapiens
Biosample type
primary cell
tissue
2
in vitro differentiated cells
Project
2
AMP
Lab
2
AMP-T2D consortium
Audit category:
2
audit script error
2
inconsistent ontology term
biosample_type!
primary cell
tissue
month_released!
October, 2022
organ_slims!
urinary bladder
BIOSAMPLE
ASSAY
2 results
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single cell RNA-seq
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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