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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
567
ChIP-seq
59
single cell RNA-seq
59
total RNA-seq
27
snATAC-seq
5
GRO-seq
2
DNase-seq
1
Hi-C
1
RRBS
1
WGBS
1
pCHi-C
Assay category
59
Transcription
Date released
22
September, 2020
12
February, 2021
11
July, 2018
10
April, 2018
2
June, 2018
1
November, 2018
1
September, 2018
Available data
59
fastq
52
zippedFastqFolder
28
tsv
26
bam
26
bigWig
2
csv
Organism
59
Homo sapiens
Biosample type
59
primary cell
Organ
pancreas
66
epithelium
3
connective tissue
Project
34
HPAP
25
AMP
Genome assembly (visualization)
23
GRCh38
23
hg19
Lab
34
Klaus Kaestner, Upenn
25
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
tissue
organ_slims!
pancreas
BIOSAMPLE
ASSAY
59 results
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single cell RNA-seq
primary cell
Langerhans cell
34
pancreatic cell
9
mesenchymal cell
6
endothelial cell
2
enteroendocrine cell
2
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