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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 279ChIP-seq
  • 247total RNA-seq
  • 200ATAC-seq
  • 187single cell RNA-seq
  • 56snATAC-seq
  • 47WGBS
  • 31DNase-seq
  • 17pCHi-C
  • 10Hi-C
  • 10RRBS
  • 2small RNA-seq
  • 1DNAme array
  • 1FAIRE-seq
Assay category
  • 187Transcription
Target of assay
  • 3control
Date released
  • 48July, 2018
  • 43April, 2018
  • 40September, 2020
  • 33May, 2022
  • 12February, 2021
  • 3August, 2018
  • 3July, 2019
  • 3June, 2018
  • 1November, 2018
  • 1September, 2018
Available data
  • 128fastq
  • 100bam
  • 100bigWig
  • 100tsv
  • 52zippedFastqFolder
  • 2csv
Organism
  • 187Homo sapiens
Biosample type
  • 187primary cell
  • 180tissue
  • 2in vitro differentiated cells
Organ
  • 74pancreas
  • 70epithelium
  • 4connective tissue
  • 3brain
Project
  • 102AMP
  • 85HPAP
Genome assembly (visualization)
  • 100GRCh38
  • 100hg19
Lab
  • 102AMP-T2D consortium
  • 85Klaus Kaestner, Upenn
Audit category:
  • 7inconsistent ontology term
BIOSAMPLE
ASSAY

187 results

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single cell RNA-seq
primary cell
Langerhans cell85
pancreatic acinar cell12
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pancreatic delta cell11
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