Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1024
total RNA-seq
819
ChIP-seq
214
ATAC-seq
174
single cell RNA-seq
173
DNase-seq
87
RNA microarray
28
snATAC-seq
25
WGBS
24
pCHi-C
16
small RNA-seq
15
Hi-C
11
RRBS
4
FAIRE-seq
4
MeRIP-seq
3
snDrop-seq
Assay category
174
Transcription
Date released
100
August, 2021
47
September, 2023
9
April, 2020
6
April, 2018
6
February, 2021
3
May, 2023
1
December, 2019
1
February, 2023
1
May, 2022
Available data
103
tsv
13
txt
6
bam
6
bigWig
6
csv
6
fastq
Organism
174
Homo sapiens
Biosample type
187
primary cell
174
tissue
2
in vitro differentiated cells
Organ
93
heart
64
kidney
9
lung
blood vessel
6
pancreas
6
vasculature
2
artery
1
liver
1
musculature of body
Project
118
AMP
47
KPMP
9
LungMap
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
107
AMP-T2D consortium
47
KPMP
11
Katalin Susztak, Upenn
9
Xin Sun, UCSD
Audit category:
5
audit script error
lab.title!
Stephen Parker, UMich
month_released!
October, 2017
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
174 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
tissue
kidney
64
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
+ See 12 more…
See all biosamples
Download