Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1282
total RNA-seq
1272
ChIP-seq
209
DNase-seq
175
ATAC-seq
103
single cell RNA-seq
18
WGBS
18
small RNA-seq
4
FAIRE-seq
1
pCHi-C
Assay category
103
Transcription
Target of assay
control
Date released
49
April, 2018
48
July, 2018
3
August, 2018
3
June, 2018
Available data
208
tsv
134
fastq
103
bam
103
bigWig
52
zippedFastqFolder
13
txt
8
csv
Organism
103
Homo sapiens
Biosample type
97
primary cell
6
tissue
Organ
80
pancreas
70
epithelium
4
connective tissue
Project
103
AMP
Genome assembly (visualization)
103
GRCh38
103
hg19
Lab
103
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
files.file_type!
tar
lab.title!
Stephen Parker, UMich
target.investigated_as!
control
BIOSAMPLE
ASSAY
103 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
+ See 11 more…
tissue
islet of Langerhans
6
See all biosamples
Download