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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1684
ChIP-seq
1291
total RNA-seq
321
ATAC-seq
209
DNase-seq
116
single cell RNA-seq
84
RNA microarray
9
WGBS
3
FAIRE-seq
1
MPRA
1
pCHi-C
1
snATAC-seq
Assay category
116
Transcription
Date released
49
April, 2018
48
July, 2018
8
August, 2021
5
February, 2021
3
August, 2018
July, 2019
3
June, 2018
Available data
208
tsv
134
fastq
103
bam
103
bigWig
52
zippedFastqFolder
13
txt
8
csv
0
bed narrowPeak
Organism
116
Homo sapiens
Biosample type
97
primary cell
19
tissue
Organ
80
pancreas
70
epithelium
13
kidney
4
connective tissue
Project
116
AMP
Genome assembly (visualization)
103
GRCh38
103
hg19
Lab
108
AMP-T2D consortium
8
Katalin Susztak, Upenn
Audit category:
7
inconsistent ontology term
5
audit script error
month_released!
July, 2019
BIOSAMPLE
ASSAY
116 results
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single cell RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
+ See 11 more…
tissue
kidney
13
islet of Langerhans
6
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