Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
727
ChIP-seq
156
total RNA-seq
68
single cell RNA-seq
29
ATAC-seq
27
snATAC-seq
12
DNase-seq
11
WGBS
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Assay category
68
Transcription
Date released
22
September, 2020
15
April, 2018
15
July, 2018
12
February, 2021
2
June, 2018
1
November, 2018
1
September, 2018
Available data
141
tsv
68
fastq
52
zippedFastqFolder
36
bam
36
bigWig
13
txt
8
csv
Organism
68
Homo sapiens
Biosample type
62
primary cell
6
tissue
Organ
75
pancreas
epithelium
3
connective tissue
Project
34
AMP
34
HPAP
Genome assembly (visualization)
32
GRCh38
32
hg19
Lab
34
AMP-T2D consortium
34
Klaus Kaestner, Upenn
Audit category:
6
inconsistent ontology term
files.file_type!
bed bedgraph
month_released!
October, 2018
organ_slims!
epithelium
BIOSAMPLE
ASSAY
68 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
primary cell
Langerhans cell
34
pancreatic cell
9
mesenchymal cell
6
pancreatic stellate cell
3
co-expressing pancreatic endocrine cell
2
+ See 4 more…
tissue
islet of Langerhans
6
See all biosamples
Download